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Summary of NPHP1 Gene Identification

Our group in Seattle, working in conjunction with Drs. Bill Dobyns and Joseph Gleeson, has identified the first gene change associated with Joubert syndrome. This has been published in the July issue of the American Journal of Human Genetics (Parisi et al., “The NPHP1 gene deletion associated with juvenile nephronophthisis is present in a subset of individuals of with Joubert syndrome,” Am. J. Hum. Genet., 2004, 75:82-91). The gene, called NPHP1, has been known to cause a kidney disease known as juvenile nephronophthisis. Approximately 60-80% of children with nephronophthisis are missing both copies of the NPHP1 gene. Because some children with Joubert syndrome develop nephronophthisis, we tested children with kidney involvement for deletions in this gene. We found this change in 1 out of 25 children who were tested, and this child had nephrophthisis and a mild form of Joubert syndrome. When we tested 80 children with Joubert syndrome whether or not they kidney involvement, we found a total of 2 children with this deletion. This result has been confirmed by Dr. Valente’s group in Italy in a child with Joubert syndrome, retinal dystrophy, and nephronophthisis.

Nephronophthisis is a form of kidney disease that is also known as medullary cystic kidney disease. It can be progressive. The symptoms may not be apparent until late childhood or early teenage years. The first symptoms are usually difficulty with concentrating the urine and sometimes anemia (low red blood cell count). This is why we recommend a complete blood count (to check hematocrit for evidence of anemia) as well as blood tests to check for kidney function (creatinine and BUN) and ultrasound examination. We also recommend a urine test to check its concentration in a sample collected when a child first wakes up (when it should be most concentrated). Later in the disease, there may be ultrasound changes such as scarring of the kidneys. Sometimes, very small cysts can be visualized in the middle of the kidney that may suggest this condition. Treatments can include medications, dialysis, and sometimes, a kidney transplant. Nephrologists or kidney doctors are the best doctors to manage this condition.

Therefore, we believe that the NPHP1 deletion represents the first molecular defect identified in a subset of children with Joubert syndrome. Children with nephronophthisis and retinal disease are at greater risk to have this genetic cause. It may also be more likely in children with milder neurologic symptoms of Joubert syndrome. However, it is important to remember that this is a very uncommon cause of Joubert syndrome, as probably less than 5% of children will have this gene deletion. We are developing recommendations for screening children with Joubert syndrome for this gene deletion. Genetic testing is probably warranted, particularly for those families interested in prenatal diagnosis, since the presence of an NPHP1 gene deletion in an older affected child would allow prenatal DNA testing as an option for first trimester diagnosis in subsequent pregnancies. We recommend annual blood and urine screening tests and ultrasound exam as outlined above for all children with Joubert syndrome. Please contact us or refer to the “Recommendations for evaluation and monitoring of patients with Joubert syndrome and related disorders” provided on the Joubert Syndrome Foundation website for further details.

Submitted by Melissa Parisi, MD, PhD and Ian Glass, MD, University of Washington, Seattle, WA

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